Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm14173-201ENSMUST00000117690 278 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm14998-201ENSMUST00000120502 495 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm25013-201ENSMUST00000158402 128 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm18199-201ENSMUST00000173820 835 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm18953-201ENSMUST00000175694 300 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm18350-201ENSMUST00000187395 955 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm37375-201ENSMUST00000193859 387 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm37477-201ENSMUST00000195215 884 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm37385-201ENSMUST00000195223 387 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm43798-201ENSMUST00000202056 394 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm45026-201ENSMUST00000205292 833 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm45008-201ENSMUST00000206420 493 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm10095-201ENSMUST00000222765 483 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm23456-201ENSMUST00000083335 137 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm26163-201ENSMUST00000083792 178 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm13440-201ENSMUST00000121665 496 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm25459-201ENSMUST00000157953 114 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm8929-201ENSMUST00000197781 1132 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm9057-201ENSMUST00000198791 296 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm44108-201ENSMUST00000203525 422 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm6009-201ENSMUST00000210848 280 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm45724-201ENSMUST00000213031 420 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm18409-202ENSMUST00000220105 529 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm9088-201ENSMUST00000220237 508 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm9237-201ENSMUST00000221499 548 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm25515-201ENSMUST00000083858 157 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm10705-201ENSMUST00000098980 461 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Smc1aQ9CU62 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Mir711-201ENSMUST00000102188 82 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm8424-201ENSMUST00000117716 988 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm15078-201ENSMUST00000118371 782 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm23408-201ENSMUST00000158523 265 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm21524-201ENSMUST00000190499 696 ntBASIC6.59□□□□□ -1.35
Smc1aQ9CU62 Gm21715-201ENSMUST00000191056 694 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms