Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm14018-201ENSMUST00000119042 455 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm13531-201ENSMUST00000121893 543 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm25782-201ENSMUST00000122526 289 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm6264-201ENSMUST00000160802 624 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm27037-201ENSMUST00000182270 960 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm37716-201ENSMUST00000193553 947 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm44382-201ENSMUST00000198683 122 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm42640-201ENSMUST00000199792 1195 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm18620-201ENSMUST00000222295 324 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 AC154634.3-201ENSMUST00000224589 736 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm24032-201ENSMUST00000083932 159 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.05□□□□□ -1.44
Cdk5rap3Q99LM2 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm11271-201ENSMUST00000116054 440 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm24363-201ENSMUST00000158440 311 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm22642-201ENSMUST00000175352 252 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm5260-201ENSMUST00000186157 949 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm42708-201ENSMUST00000196332 905 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm43222-201ENSMUST00000199013 603 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm44219-201ENSMUST00000203005 273 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm10688-201ENSMUST00000214985 520 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm5055-201ENSMUST00000215697 581 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Mir7b-201ENSMUST00000083557 111 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdk5rap3Q99LM2 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Gm22499-201ENSMUST00000104501 135 ntBASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Gm24069-201ENSMUST00000104512 127 ntBASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Gm12939-201ENSMUST00000117303 165 ntBASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Gm15332-201ENSMUST00000118386 357 ntBASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Gm12375-201ENSMUST00000119331 921 ntBASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Gm14267-201ENSMUST00000119751 496 ntBASIC6.03□□□□□ -1.44
Cdk5rap3Q99LM2 Gm15152-201ENSMUST00000121540 394 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms