Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm13724-201ENSMUST00000122395 1155 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm25219-201ENSMUST00000157545 330 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm25227-201ENSMUST00000158204 112 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm28885-201ENSMUST00000185615 563 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm37809-201ENSMUST00000195050 931 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm5694-201ENSMUST00000195648 641 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm42646-201ENSMUST00000202233 914 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm19764-201ENSMUST00000203630 649 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm44251-201ENSMUST00000204963 442 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm7808-201ENSMUST00000082002 387 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm23737-201ENSMUST00000082547 159 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm23502-201ENSMUST00000083902 145 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.95□□□□□ -1.46
Ccdc28aQ8CEI3 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm14783-201ENSMUST00000118900 663 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm25989-201ENSMUST00000158761 133 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm21839-201ENSMUST00000179536 378 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm37503-201ENSMUST00000192088 319 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm38122-201ENSMUST00000192679 885 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm19921-201ENSMUST00000210505 703 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 AC154904.1-201ENSMUST00000219510 312 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm7887-201ENSMUST00000056948 537 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc28aQ8CEI3 Pramel-201ENSMUST00000118979 1383 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Mir683-2-201ENSMUST00000102099 109 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Gm9836-201ENSMUST00000117132 216 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Gm12110-201ENSMUST00000121601 579 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Gm23233-201ENSMUST00000157301 137 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Gm6872-201ENSMUST00000165001 700 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Gm22642-201ENSMUST00000175352 252 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Gm18006-201ENSMUST00000177411 662 ntBASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc28aQ8CEI3 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms