Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Atg4aQ8C9S8 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm25459-201ENSMUST00000157953 114 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm2367-201ENSMUST00000192374 472 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm45733-201ENSMUST00000212988 437 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm4510-201ENSMUST00000218265 427 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.92□□□□□ -1.3
Atg4aQ8C9S8 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm11447-201ENSMUST00000118983 858 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm14938-201ENSMUST00000119482 943 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm8545-201ENSMUST00000120692 801 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm15044-201ENSMUST00000120703 598 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm22210-201ENSMUST00000158101 144 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm9006-201ENSMUST00000165520 841 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm22690-201ENSMUST00000175054 110 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm38040-201ENSMUST00000193505 225 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm45359-201ENSMUST00000210635 427 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm19116-201ENSMUST00000218592 642 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Atg4aQ8C9S8 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms