Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC8.1□□□□□ -1.11
Usp47Q8BY87 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Gm37880-201ENSMUST00000192216 3257 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Gm38029-201ENSMUST00000192669 2090 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Gm27225-201ENSMUST00000183833 557 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Igkv12-66-201ENSMUST00000199305 348 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 AC153800.1-201ENSMUST00000219212 365 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Gm9202-201ENSMUST00000223036 437 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 AC123665.4-201ENSMUST00000228790 249 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Rybp-ps-201ENSMUST00000069489 681 ntBASIC8.1□□□□□ -1.11
Usp47Q8BY87 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp47Q8BY87 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp47Q8BY87 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC8.09□□□□□ -1.11
Usp47Q8BY87 AC115289.2-201ENSMUST00000223836 2803 ntBASIC8.09□□□□□ -1.11
Usp47Q8BY87 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp47Q8BY87 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp47Q8BY87 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC8.09□□□□□ -1.11
Usp47Q8BY87 Gm37249-201ENSMUST00000195185 2869 ntBASIC8.09□□□□□ -1.11
Usp47Q8BY87 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp47Q8BY87 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp47Q8BY87 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Usp47Q8BY87 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp47Q8BY87 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp47Q8BY87 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Usp47Q8BY87 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Usp47Q8BY87 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC8.09□□□□□ -1.11
Usp47Q8BY87 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp47Q8BY87 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Usp47Q8BY87 Gm14836-201ENSMUST00000118567 471 ntBASIC8.09□□□□□ -1.12
Usp47Q8BY87 Gm13259-201ENSMUST00000120792 456 ntBASIC8.09□□□□□ -1.12
Usp47Q8BY87 Gm12936-201ENSMUST00000121439 301 ntBASIC8.09□□□□□ -1.12
Usp47Q8BY87 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC8.09□□□□□ -1.12
Usp47Q8BY87 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC8.09□□□□□ -1.12
Usp47Q8BY87 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
Usp47Q8BY87 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC8.09□□□□□ -1.12
Usp47Q8BY87 Gm27409-201ENSMUST00000184727 80 ntBASIC8.09□□□□□ -1.12
Usp47Q8BY87 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC8.09□□□□□ -1.12
Usp47Q8BY87 Gm28188-201ENSMUST00000190483 236 ntBASIC8.09□□□□□ -1.12
Usp47Q8BY87 Gm28467-201ENSMUST00000190981 318 ntBASIC8.09□□□□□ -1.12
Usp47Q8BY87 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC8.09□□□□□ -1.12
Usp47Q8BY87 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC8.09□□□□□ -1.12
Usp47Q8BY87 Gm44132-201ENSMUST00000205142 151 ntBASIC8.09□□□□□ -1.12
Usp47Q8BY87 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC8.09□□□□□ -1.12
Usp47Q8BY87 AC161884.2-201ENSMUST00000224513 227 ntBASIC8.09□□□□□ -1.12
Usp47Q8BY87 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Usp47Q8BY87 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC8.09□□□□□ -1.12
Usp47Q8BY87 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Usp47Q8BY87 Mir7-2-201ENSMUST00000083675 97 ntBASIC8.09□□□□□ -1.12
Usp47Q8BY87 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Usp47Q8BY87 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.12
Usp47Q8BY87 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm45426-201ENSMUST00000209393 3672 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm43395-201ENSMUST00000198717 2240 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm43857-201ENSMUST00000200343 3079 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm38299-201ENSMUST00000193214 3789 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp47Q8BY87 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm37183-201ENSMUST00000191712 3405 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm17142-201ENSMUST00000164933 645 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm23872-201ENSMUST00000175432 77 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm4617-201ENSMUST00000178993 331 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 AC138284.5-201ENSMUST00000214389 652 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 AL603745.1-201ENSMUST00000215473 532 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm18705-201ENSMUST00000215985 913 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC8.08□□□□□ -1.12
Usp47Q8BY87 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Gm42923-201ENSMUST00000198438 2896 ntBASIC8.08□□□□□ -1.12
Usp47Q8BY87 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp47Q8BY87 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp47Q8BY87 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms