Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm21877-201ENSMUST00000185640 694 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm21139-201ENSMUST00000186594 877 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm37784-201ENSMUST00000193233 189 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm45845-201ENSMUST00000207326 582 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm9292-201ENSMUST00000222008 710 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm4822-201ENSMUST00000077551 479 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm10145-201ENSMUST00000077776 462 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Fam107b-209ENSMUST00000226435 3602 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm25795-201ENSMUST00000104421 132 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm8501-201ENSMUST00000117684 432 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm12396-201ENSMUST00000121600 306 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm12451-201ENSMUST00000121636 633 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm23229-201ENSMUST00000157297 105 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm23082-201ENSMUST00000157852 133 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm5430-201ENSMUST00000182525 915 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm27348-201ENSMUST00000184511 170 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm28885-201ENSMUST00000185615 563 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm37581-201ENSMUST00000192371 988 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm37809-201ENSMUST00000195050 931 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm37358-201ENSMUST00000195492 479 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm5050-201ENSMUST00000197164 775 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm42640-201ENSMUST00000199792 1195 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm36378-201ENSMUST00000201709 388 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm44559-201ENSMUST00000207177 1012 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm8911-201ENSMUST00000213986 652 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm18247-201ENSMUST00000222937 601 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm24041-201ENSMUST00000083115 156 ntBASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc40Q8BI79 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms