Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm21731-201ENSMUST00000079524 489 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 mt-Tr-201ENSMUST00000082412 68 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 n-R5s196-201ENSMUST00000083136 117 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm22126-201ENSMUST00000083244 142 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm14415-201ENSMUST00000118260 1578 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 AC154597.1-201ENSMUST00000224095 2713 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Gm9403-201ENSMUST00000196299 2181 ntBASIC5.79□□□□□ -1.48
Col8a1Q00780 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col8a1Q00780 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Col8a1Q00780 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Mir760-201ENSMUST00000103257 119 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm8250-201ENSMUST00000117398 774 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm15094-201ENSMUST00000118394 1131 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm15854-201ENSMUST00000118879 808 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm13690-201ENSMUST00000118989 285 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm5943-201ENSMUST00000119458 459 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm12919-201ENSMUST00000119855 1594 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm16463-201ENSMUST00000120527 721 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm13484-201ENSMUST00000120738 412 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm12313-201ENSMUST00000121347 421 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm15006-201ENSMUST00000121419 1122 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm23674-201ENSMUST00000157473 131 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm23539-201ENSMUST00000157537 224 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm26159-201ENSMUST00000158968 104 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm26652-202ENSMUST00000181672 475 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm27236-201ENSMUST00000184147 442 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm27160-201ENSMUST00000184837 199 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm28655-201ENSMUST00000191538 692 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm37420-201ENSMUST00000195332 2912 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 AC153541.1-201ENSMUST00000213786 294 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm3266-201ENSMUST00000217832 591 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm4012-201ENSMUST00000221504 581 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC5.78□□□□□ -1.48
Col8a1Q00780 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 CT010480.5-201ENSMUST00000225026 217 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 AC174797.5-201ENSMUST00000225055 1860 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 AC118639.1-204ENSMUST00000226401 694 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gm2840-201ENSMUST00000048361 411 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col8a1Q00780 AW822073-201ENSMUST00000075305 555 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Mir298-201ENSMUST00000083476 82 ntBASIC5.78□□□□□ -1.48
Col8a1Q00780 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col8a1Q00780 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col8a1Q00780 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms