Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm18717-201ENSMUST00000192744 1241 ntBASIC3.84□□□□□ -1.79
PrkdcP97313 Gm7042-201ENSMUST00000223027 384 ntBASIC3.84□□□□□ -1.79
PrkdcP97313 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PrkdcP97313 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PrkdcP97313 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC3.84□□□□□ -1.8
PrkdcP97313 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.8
PrkdcP97313 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PrkdcP97313 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
PrkdcP97313 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
PrkdcP97313 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC3.84□□□□□ -1.8
PrkdcP97313 Gm43180-201ENSMUST00000197541 2886 ntBASIC3.84□□□□□ -1.8
PrkdcP97313 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PrkdcP97313 Gm15297-201ENSMUST00000117795 290 ntBASIC3.84□□□□□ -1.8
PrkdcP97313 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PrkdcP97313 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PrkdcP97313 Gm37206-201ENSMUST00000195512 3069 ntBASIC3.84□□□□□ -1.8
PrkdcP97313 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC3.84□□□□□ -1.8
PrkdcP97313 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PrkdcP97313 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.84□□□□□ -1.8
PrkdcP97313 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PrkdcP97313 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm44441-201ENSMUST00000203642 2475 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm42540-201ENSMUST00000200319 2008 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm23273-201ENSMUST00000104058 135 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Gm11912-201ENSMUST00000117235 264 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Gm15333-201ENSMUST00000118825 364 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC3.83□□□□□ -1.8
PrkdcP97313 Ighv10-4-201ENSMUST00000193702 299 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm45525-201ENSMUST00000210800 389 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 AC151734.1-201ENSMUST00000227023 1740 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC3.83□□□□□ -1.8
PrkdcP97313 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm26814-201ENSMUST00000181178 4149 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm43027-201ENSMUST00000202906 3691 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm37186-201ENSMUST00000195629 2861 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Lpar2-201ENSMUST00000034325 5701 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.83□□□□□ -1.8
PrkdcP97313 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC3.83□□□□□ -1.8
PrkdcP97313 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm3531-201ENSMUST00000162698 489 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC3.83□□□□□ -1.8
PrkdcP97313 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PrkdcP97313 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PrkdcP97313 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PrkdcP97313 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PrkdcP97313 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms