Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3f3aP84244 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
H3f3aP84244 Gm13428-201ENSMUST00000117540 365 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Gm15877-201ENSMUST00000121897 964 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Gm25782-201ENSMUST00000122526 289 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3f3aP84244 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.19□□□□□ -1.58
H3f3aP84244 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
H3f3aP84244 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
H3f3aP84244 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.19□□□□□ -1.58
H3f3aP84244 Vis1-201ENSMUST00000183957 201 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Gm19124-201ENSMUST00000191041 832 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Gm43743-202ENSMUST00000198353 491 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Gm42961-201ENSMUST00000202023 181 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Gm2040-201ENSMUST00000202979 289 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Gm45156-201ENSMUST00000207255 439 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
H3f3aP84244 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC5.19□□□□□ -1.58
H3f3aP84244 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
H3f3aP84244 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.19□□□□□ -1.58
H3f3aP84244 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3f3aP84244 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
H3f3aP84244 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
H3f3aP84244 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3f3aP84244 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
H3f3aP84244 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
H3f3aP84244 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
H3f3aP84244 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
H3f3aP84244 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.19□□□□□ -1.58
H3f3aP84244 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
H3f3aP84244 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
H3f3aP84244 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Gm43526-201ENSMUST00000196666 1565 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
H3f3aP84244 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.18□□□□□ -1.58
H3f3aP84244 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Gm15660-201ENSMUST00000118997 478 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Gm11848-201ENSMUST00000121207 973 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.18□□□□□ -1.58
H3f3aP84244 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Gm25660-201ENSMUST00000158470 104 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Gm24103-201ENSMUST00000174930 77 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
H3f3aP84244 Gm2539-203ENSMUST00000181352 746 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.18□□□□□ -1.58
H3f3aP84244 Gm42776-201ENSMUST00000198031 406 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.18□□□□□ -1.58
H3f3aP84244 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Gm45082-201ENSMUST00000206082 601 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Gm38574-201ENSMUST00000211855 640 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.18□□□□□ -1.58
H3f3aP84244 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
H3f3aP84244 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
H3f3aP84244 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
H3f3aP84244 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
H3f3aP84244 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.18□□□□□ -1.58
H3f3aP84244 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
H3f3aP84244 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
H3f3aP84244 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.18□□□□□ -1.58
H3f3aP84244 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
H3f3aP84244 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
H3f3aP84244 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
H3f3aP84244 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
H3f3aP84244 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
H3f3aP84244 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
H3f3aP84244 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3f3aP84244 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
H3f3aP84244 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.17□□□□□ -1.58
H3f3aP84244 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
H3f3aP84244 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms