Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC6.44□□□□□ -1.38
CiitaP79621 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.44□□□□□ -1.38
CiitaP79621 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.44□□□□□ -1.38
CiitaP79621 AC132433.1-201ENSMUST00000221553 1101 ntBASIC6.44□□□□□ -1.38
CiitaP79621 AC158536.1-201ENSMUST00000222510 256 ntBASIC6.44□□□□□ -1.38
CiitaP79621 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.44□□□□□ -1.38
CiitaP79621 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.44□□□□□ -1.38
CiitaP79621 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CiitaP79621 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CiitaP79621 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CiitaP79621 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CiitaP79621 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CiitaP79621 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CiitaP79621 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CiitaP79621 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.44□□□□□ -1.38
CiitaP79621 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CiitaP79621 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CiitaP79621 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CiitaP79621 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CiitaP79621 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CiitaP79621 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CiitaP79621 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.43□□□□□ -1.38
CiitaP79621 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CiitaP79621 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CiitaP79621 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CiitaP79621 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.43□□□□□ -1.38
CiitaP79621 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
CiitaP79621 Mup-ps16-201ENSMUST00000120085 596 ntBASIC6.43□□□□□ -1.38
CiitaP79621 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.43□□□□□ -1.38
CiitaP79621 Gm25826-201ENSMUST00000157090 137 ntBASIC6.43□□□□□ -1.38
CiitaP79621 Gm22730-201ENSMUST00000158085 171 ntBASIC6.43□□□□□ -1.38
CiitaP79621 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CiitaP79621 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CiitaP79621 Vis1-201ENSMUST00000183957 201 ntBASIC6.43□□□□□ -1.38
CiitaP79621 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC6.43□□□□□ -1.38
CiitaP79621 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.43□□□□□ -1.38
CiitaP79621 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.43□□□□□ -1.38
CiitaP79621 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.43□□□□□ -1.38
CiitaP79621 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CiitaP79621 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.43□□□□□ -1.38
CiitaP79621 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.43□□□□□ -1.38
CiitaP79621 Gm8523-201ENSMUST00000211386 552 ntBASIC6.43□□□□□ -1.38
CiitaP79621 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CiitaP79621 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.43□□□□□ -1.38
CiitaP79621 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.43□□□□□ -1.38
CiitaP79621 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.43□□□□□ -1.38
CiitaP79621 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CiitaP79621 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.43□□□□□ -1.38
CiitaP79621 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CiitaP79621 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CiitaP79621 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CiitaP79621 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CiitaP79621 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CiitaP79621 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CiitaP79621 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
CiitaP79621 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CiitaP79621 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CiitaP79621 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CiitaP79621 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.43□□□□□ -1.38
CiitaP79621 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CiitaP79621 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.42□□□□□ -1.38
CiitaP79621 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CiitaP79621 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CiitaP79621 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CiitaP79621 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CiitaP79621 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CiitaP79621 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CiitaP79621 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.42□□□□□ -1.38
CiitaP79621 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.42□□□□□ -1.38
CiitaP79621 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.42□□□□□ -1.38
CiitaP79621 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
CiitaP79621 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CiitaP79621 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.42□□□□□ -1.38
CiitaP79621 Gm13866-201ENSMUST00000118901 968 ntBASIC6.42□□□□□ -1.38
CiitaP79621 Gm16423-201ENSMUST00000120078 947 ntBASIC6.42□□□□□ -1.38
CiitaP79621 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.42□□□□□ -1.38
CiitaP79621 Gm25439-201ENSMUST00000158280 131 ntBASIC6.42□□□□□ -1.38
CiitaP79621 Gm20549-201ENSMUST00000174804 429 ntBASIC6.42□□□□□ -1.38
CiitaP79621 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC6.42□□□□□ -1.38
CiitaP79621 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.42□□□□□ -1.38
CiitaP79621 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CiitaP79621 Gm43436-201ENSMUST00000199308 147 ntBASIC6.42□□□□□ -1.38
CiitaP79621 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC6.42□□□□□ -1.38
CiitaP79621 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.42□□□□□ -1.38
CiitaP79621 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.42□□□□□ -1.38
CiitaP79621 AC158142.3-201ENSMUST00000226230 675 ntBASIC6.42□□□□□ -1.38
CiitaP79621 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CiitaP79621 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CiitaP79621 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
CiitaP79621 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CiitaP79621 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
CiitaP79621 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CiitaP79621 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CiitaP79621 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CiitaP79621 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CiitaP79621 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.42□□□□□ -1.38
CiitaP79621 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.42□□□□□ -1.38
CiitaP79621 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CiitaP79621 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CiitaP79621 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms