Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Dcdc5-202ENSMUST00000122388 4957 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm6877-201ENSMUST00000119347 1101 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm23392-201ENSMUST00000157580 113 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm24781-201ENSMUST00000157636 117 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm26486-201ENSMUST00000158021 110 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm23046-201ENSMUST00000158369 284 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm9064-201ENSMUST00000163579 566 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm20691-201ENSMUST00000176889 333 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm22252-201ENSMUST00000179316 79 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm18709-201ENSMUST00000180564 489 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC7.82□□□□□ -1.16
Rfx1P48377 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm28542-201ENSMUST00000185545 696 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm28185-201ENSMUST00000186815 694 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm29659-201ENSMUST00000187063 696 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm28682-201ENSMUST00000187430 696 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm28738-201ENSMUST00000187480 696 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm29319-201ENSMUST00000188060 696 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm29263-201ENSMUST00000188718 463 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm29312-201ENSMUST00000188724 696 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm29637-201ENSMUST00000188877 696 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm29181-201ENSMUST00000191288 696 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm35323-201ENSMUST00000191836 499 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm37433-201ENSMUST00000192695 678 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm37441-201ENSMUST00000194430 678 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm3544-201ENSMUST00000196129 305 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm19185-201ENSMUST00000196365 643 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm44432-201ENSMUST00000203342 938 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rfx1P48377 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm44857-201ENSMUST00000208331 196 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Gm6885-201ENSMUST00000217261 372 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 AC139845.2-201ENSMUST00000227504 436 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rfx1P48377 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rfx1P48377 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Rfx1P48377 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Rfx1P48377 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Rfx1P48377 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rfx1P48377 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rfx1P48377 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rfx1P48377 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rfx1P48377 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm43176-201ENSMUST00000199653 2989 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm42544-201ENSMUST00000197868 3242 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Rfx1P48377 AC113031.7-201ENSMUST00000228609 1928 ntBASIC7.82□□□□□ -1.16
Rfx1P48377 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rfx1P48377 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.82□□□□□ -1.16
Rfx1P48377 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rfx1P48377 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Rfx1P48377 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Rfx1P48377 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Rfx1P48377 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.81□□□□□ -1.16
Rfx1P48377 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 AC122024.1-201ENSMUST00000219276 4850 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
Rfx1P48377 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Rfx1P48377 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm25760-201ENSMUST00000103989 132 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm25379-201ENSMUST00000104338 114 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm24473-201ENSMUST00000104483 131 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Rfx1P48377 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm7129-201ENSMUST00000117402 997 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Rfx1P48377 Gm13604-201ENSMUST00000119332 482 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm13367-201ENSMUST00000119955 796 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm4992-201ENSMUST00000120256 768 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm14038-201ENSMUST00000121500 807 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.81□□□□□ -1.16
Rfx1P48377 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Rfx1P48377 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms