Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
BdnfP21237 Gm37375-201ENSMUST00000193859 387 ntBASIC6□□□□□ -1.45
BdnfP21237 Gm37385-201ENSMUST00000195223 387 ntBASIC6□□□□□ -1.45
BdnfP21237 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6□□□□□ -1.45
BdnfP21237 Gm9504-201ENSMUST00000196322 468 ntBASIC6□□□□□ -1.45
BdnfP21237 Gm43798-201ENSMUST00000202056 394 ntBASIC6□□□□□ -1.45
BdnfP21237 Gm43090-201ENSMUST00000202459 314 ntBASIC6□□□□□ -1.45
BdnfP21237 Gm44665-201ENSMUST00000205381 251 ntBASIC6□□□□□ -1.45
BdnfP21237 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6□□□□□ -1.45
BdnfP21237 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6□□□□□ -1.45
BdnfP21237 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6□□□□□ -1.45
BdnfP21237 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6□□□□□ -1.45
BdnfP21237 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6□□□□□ -1.45
BdnfP21237 Gm23054-201ENSMUST00000082804 162 ntBASIC6□□□□□ -1.45
BdnfP21237 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BdnfP21237 Gm37100-201ENSMUST00000193344 1353 ntBASIC6□□□□□ -1.45
BdnfP21237 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BdnfP21237 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BdnfP21237 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
BdnfP21237 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BdnfP21237 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6□□□□□ -1.45
BdnfP21237 Gm42781-201ENSMUST00000201317 2719 ntBASIC6□□□□□ -1.45
BdnfP21237 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
BdnfP21237 Fam35a-206ENSMUST00000228626 3100 ntBASIC6□□□□□ -1.45
BdnfP21237 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BdnfP21237 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
BdnfP21237 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6□□□□□ -1.45
BdnfP21237 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6□□□□□ -1.45
BdnfP21237 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6□□□□□ -1.45
BdnfP21237 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
BdnfP21237 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.99□□□□□ -1.45
BdnfP21237 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
BdnfP21237 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.99□□□□□ -1.45
BdnfP21237 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
BdnfP21237 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
BdnfP21237 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
BdnfP21237 Gm15789-201ENSMUST00000118992 1359 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
BdnfP21237 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
BdnfP21237 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
BdnfP21237 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
BdnfP21237 Gm12573-201ENSMUST00000118158 286 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Gm12115-201ENSMUST00000119969 447 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC5.99□□□□□ -1.45
BdnfP21237 Gm22084-201ENSMUST00000157585 105 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Gm8715-201ENSMUST00000162728 531 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
BdnfP21237 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
BdnfP21237 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
BdnfP21237 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 Gm8609-201ENSMUST00000182967 998 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.99□□□□□ -1.45
BdnfP21237 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC5.99□□□□□ -1.45
BdnfP21237 Gm43576-201ENSMUST00000197937 871 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Gm43371-201ENSMUST00000202838 1031 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Gm20177-201ENSMUST00000203705 334 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC5.99□□□□□ -1.45
BdnfP21237 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC5.99□□□□□ -1.45
BdnfP21237 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
BdnfP21237 Gm44896-201ENSMUST00000206190 772 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.99□□□□□ -1.45
BdnfP21237 Gm2996-201ENSMUST00000211398 537 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC5.99□□□□□ -1.45
BdnfP21237 Gm18329-201ENSMUST00000215832 589 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 Gm18955-201ENSMUST00000223173 649 ntBASIC5.99□□□□□ -1.45
BdnfP21237 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.99□□□□□ -1.45
BdnfP21237 CT009711.2-201ENSMUST00000225352 934 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
BdnfP21237 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
BdnfP21237 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.99□□□□□ -1.45
BdnfP21237 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
BdnfP21237 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC5.99□□□□□ -1.45
BdnfP21237 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BdnfP21237 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
BdnfP21237 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
BdnfP21237 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
BdnfP21237 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
BdnfP21237 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.98□□□□□ -1.45
BdnfP21237 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
BdnfP21237 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
BdnfP21237 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms