Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.17□□□□□ -1.58
P20040 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
P20040 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.17□□□□□ -1.58
P20040 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
P20040 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
P20040 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.17□□□□□ -1.58
P20040 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
P20040 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
P20040 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.16□□□□□ -1.58
P20040 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
P20040 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.16□□□□□ -1.58
P20040 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
P20040 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.16□□□□□ -1.58
P20040 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
P20040 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.16□□□□□ -1.58
P20040 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.16□□□□□ -1.58
P20040 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Gm23440-201ENSMUST00000104299 130 ntBASIC5.16□□□□□ -1.58
P20040 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
P20040 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.16□□□□□ -1.58
P20040 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.16□□□□□ -1.58
P20040 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.16□□□□□ -1.58
P20040 Gm13998-201ENSMUST00000120952 335 ntBASIC5.16□□□□□ -1.58
P20040 Gm14603-201ENSMUST00000121275 448 ntBASIC5.16□□□□□ -1.58
P20040 Gm14732-201ENSMUST00000121372 545 ntBASIC5.16□□□□□ -1.58
P20040 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.16□□□□□ -1.58
P20040 Gm24103-201ENSMUST00000174930 77 ntBASIC5.16□□□□□ -1.58
P20040 Gm24081-201ENSMUST00000175177 125 ntBASIC5.16□□□□□ -1.58
P20040 Gm15257-201ENSMUST00000177680 883 ntBASIC5.16□□□□□ -1.58
P20040 Gm15252-201ENSMUST00000177750 883 ntBASIC5.16□□□□□ -1.58
P20040 Gm15256-201ENSMUST00000177793 883 ntBASIC5.16□□□□□ -1.58
P20040 Gm25065-201ENSMUST00000177914 132 ntBASIC5.16□□□□□ -1.58
P20040 Gm15260-201ENSMUST00000179402 883 ntBASIC5.16□□□□□ -1.58
P20040 Gm25891-201ENSMUST00000180050 132 ntBASIC5.16□□□□□ -1.58
P20040 Gm27468-201ENSMUST00000183577 106 ntBASIC5.16□□□□□ -1.58
P20040 Gm8367-201ENSMUST00000186145 887 ntBASIC5.16□□□□□ -1.58
P20040 Gm28975-201ENSMUST00000186412 686 ntBASIC5.16□□□□□ -1.58
P20040 Gm28080-201ENSMUST00000188552 722 ntBASIC5.16□□□□□ -1.58
P20040 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.16□□□□□ -1.58
P20040 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Gm21524-201ENSMUST00000190499 696 ntBASIC5.16□□□□□ -1.58
P20040 Gm21715-201ENSMUST00000191056 694 ntBASIC5.16□□□□□ -1.58
P20040 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.16□□□□□ -1.58
P20040 Gm37375-201ENSMUST00000193859 387 ntBASIC5.16□□□□□ -1.58
P20040 Gm37385-201ENSMUST00000195223 387 ntBASIC5.16□□□□□ -1.58
P20040 Gm43798-201ENSMUST00000202056 394 ntBASIC5.16□□□□□ -1.58
P20040 Gm44251-201ENSMUST00000204963 442 ntBASIC5.16□□□□□ -1.58
P20040 Gm18537-201ENSMUST00000205709 989 ntBASIC5.16□□□□□ -1.58
P20040 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
P20040 Gm7499-201ENSMUST00000210423 813 ntBASIC5.16□□□□□ -1.58
P20040 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.16□□□□□ -1.58
P20040 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.16□□□□□ -1.58
P20040 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.16□□□□□ -1.58
P20040 Gm2614-201ENSMUST00000223227 403 ntBASIC5.16□□□□□ -1.58
P20040 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.16□□□□□ -1.58
P20040 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
P20040 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.16□□□□□ -1.58
P20040 Gm25133-201ENSMUST00000082647 130 ntBASIC5.16□□□□□ -1.58
P20040 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.16□□□□□ -1.58
P20040 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.16□□□□□ -1.58
P20040 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
P20040 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.16□□□□□ -1.58
P20040 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
P20040 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
P20040 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.16□□□□□ -1.58
P20040 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
P20040 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.16□□□□□ -1.58
P20040 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.15□□□□□ -1.58
P20040 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
P20040 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
P20040 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
P20040 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
P20040 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
P20040 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.15□□□□□ -1.58
P20040 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
P20040 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
P20040 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.15□□□□□ -1.58
P20040 Gm23739-201ENSMUST00000102295 108 ntBASIC5.15□□□□□ -1.59
P20040 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
P20040 Gm25917-201ENSMUST00000104267 130 ntBASIC5.15□□□□□ -1.59
P20040 Gm25345-201ENSMUST00000104505 133 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms