Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm7733-201ENSMUST00000199038 919 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm10709-201ENSMUST00000213318 480 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Mir342-201ENSMUST00000083502 99 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm43113-201ENSMUST00000199713 1754 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm43981-201ENSMUST00000203285 1467 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm38325-201ENSMUST00000194507 1377 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm28874-201ENSMUST00000190917 3134 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm23537-201ENSMUST00000157536 330 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm27541-201ENSMUST00000184078 122 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm29755-201ENSMUST00000196976 948 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm45908-201ENSMUST00000212977 1177 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 AC124408.2-201ENSMUST00000228168 645 ntBASIC4.89□□□□□ -1.63
Col6a4A2AX52 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a4A2AX52 Gm42892-201ENSMUST00000196227 3973 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a4A2AX52 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm15044-201ENSMUST00000120703 598 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm22867-201ENSMUST00000157499 109 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm27286-201ENSMUST00000184934 179 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm28428-201ENSMUST00000188886 697 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm6520-201ENSMUST00000200636 410 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm44219-201ENSMUST00000203005 273 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm5341-201ENSMUST00000058881 489 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm16523-202ENSMUST00000203640 4750 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 AC167013.5-201ENSMUST00000227597 2947 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a4A2AX52 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm9320-201ENSMUST00000184151 473 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm37631-201ENSMUST00000192275 364 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a4A2AX52 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC4.88□□□□□ -1.63
Col6a4A2AX52 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC4.88□□□□□ -1.63
Col6a4A2AX52 AV026068-220ENSMUST00000224153 1147 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 AV026068-224ENSMUST00000224827 928 ntBASIC4.88□□□□□ -1.63
Col6a4A2AX52 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms