Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Scn3aA2ASI5 Gm23839-201ENSMUST00000116957 109 ntBASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Gm13579-201ENSMUST00000118519 517 ntBASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Gm13887-201ENSMUST00000119009 344 ntBASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Gm5405-201ENSMUST00000120478 609 ntBASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Gm13259-201ENSMUST00000120792 456 ntBASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Gm15501-202ENSMUST00000140687 625 ntBASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Gm8321-201ENSMUST00000181691 980 ntBASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Gm28188-201ENSMUST00000190483 236 ntBASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.4□□□□□ -1.38
Scn3aA2ASI5 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm13681-201ENSMUST00000117925 210 ntBASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm15754-201ENSMUST00000119191 478 ntBASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm6175-201ENSMUST00000121351 400 ntBASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm26489-201ENSMUST00000157880 264 ntBASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm45185-201ENSMUST00000207556 404 ntBASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm33601-201ENSMUST00000210001 961 ntBASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm45777-201ENSMUST00000213009 301 ntBASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm8290-201ENSMUST00000218202 477 ntBASIC6.4□□□□□ -1.39
Scn3aA2ASI5 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.4□□□□□ -1.39
Scn3aA2ASI5 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Scn3aA2ASI5 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm8595-201ENSMUST00000118250 630 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm6382-201ENSMUST00000118873 942 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm12654-201ENSMUST00000120387 587 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Mir1945-201ENSMUST00000157919 78 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm23872-201ENSMUST00000175432 77 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28604-201ENSMUST00000186629 484 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28566-201ENSMUST00000186714 484 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28194-201ENSMUST00000187412 484 ntBASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scn3aA2ASI5 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms