Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Gm42886-201ENSMUST00000199214 466 ntBASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Gm42646-201ENSMUST00000202233 914 ntBASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.76□□□□□ -1.49
H2afb2S4R1M3 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.76□□□□□ -1.49
H2afb2S4R1M3 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.76□□□□□ -1.49
H2afb2S4R1M3 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm26144-201ENSMUST00000104475 132 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm13991-201ENSMUST00000120190 648 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm15335-201ENSMUST00000122442 411 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm26046-201ENSMUST00000157312 166 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm22867-201ENSMUST00000157499 109 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm22599-201ENSMUST00000157597 132 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm8032-201ENSMUST00000171009 574 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm3715-201ENSMUST00000172308 617 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm4832-201ENSMUST00000182679 399 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm18205-201ENSMUST00000209215 841 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm6068-201ENSMUST00000222270 387 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm5612-201ENSMUST00000053326 375 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Olfr519-201ENSMUST00000084752 960 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.75□□□□□ -1.49
H2afb2S4R1M3 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.75□□□□□ -1.49
H2afb2S4R1M3 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm23294-201ENSMUST00000104150 164 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm14529-201ENSMUST00000117894 406 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm11902-201ENSMUST00000118849 270 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm4914-201ENSMUST00000119757 459 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm22492-201ENSMUST00000157192 297 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm22932-201ENSMUST00000175510 72 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm31306-201ENSMUST00000197517 508 ntBASIC5.74□□□□□ -1.49
H2afb2S4R1M3 Gm19900-201ENSMUST00000207285 576 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms