Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm22953-201ENSMUST00000116724 101 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm14539-201ENSMUST00000117527 174 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm8317-201ENSMUST00000121261 471 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm12396-201ENSMUST00000121600 306 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm24687-201ENSMUST00000157758 241 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm24179-201ENSMUST00000158925 127 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm25065-201ENSMUST00000177914 132 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm25891-201ENSMUST00000180050 132 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm28934-201ENSMUST00000186491 346 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm18698-201ENSMUST00000192327 668 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm36378-201ENSMUST00000201709 388 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm9088-201ENSMUST00000220237 508 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm24454-201ENSMUST00000083349 132 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim3Q9R1R2 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm14667-201ENSMUST00000119448 1350 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm23739-201ENSMUST00000102295 108 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm11821-201ENSMUST00000117335 979 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm24383-201ENSMUST00000122691 333 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm4660-201ENSMUST00000131499 403 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm24733-201ENSMUST00000158863 253 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Olfr331-202ENSMUST00000170501 957 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm22698-201ENSMUST00000175375 108 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm27762-201ENSMUST00000183417 109 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm44312-201ENSMUST00000203536 469 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm10095-201ENSMUST00000222765 483 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.56□□□□□ -1.52
Trim3Q9R1R2 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Trim3Q9R1R2 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms