Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm24041-201ENSMUST00000083115 156 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm6620-201ENSMUST00000120113 715 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm7700-201ENSMUST00000120273 970 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm12396-201ENSMUST00000121600 306 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm22530-201ENSMUST00000158820 118 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm18199-201ENSMUST00000173820 835 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Mir3097-201ENSMUST00000175356 67 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm5430-201ENSMUST00000182525 915 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm37609-201ENSMUST00000191778 678 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm29745-201ENSMUST00000198005 687 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm4742-201ENSMUST00000200261 771 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm36378-201ENSMUST00000201709 388 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm45156-201ENSMUST00000207255 439 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm25515-201ENSMUST00000083858 157 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdc40Q9DC48 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm13641-201ENSMUST00000117993 473 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm23408-201ENSMUST00000158523 265 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm6472-201ENSMUST00000178147 651 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm38181-201ENSMUST00000181357 720 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Mir7008-201ENSMUST00000184398 63 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm37203-201ENSMUST00000191618 385 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm38131-201ENSMUST00000192449 430 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm37358-201ENSMUST00000195492 479 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm35013-201ENSMUST00000197218 832 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.47□□□□□ -1.53
Cdc40Q9DC48 Gm44316-201ENSMUST00000199274 97 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms