Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm23768-201ENSMUST00000104440 131 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm11799-201ENSMUST00000116110 460 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm14116-201ENSMUST00000117733 805 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm8475-201ENSMUST00000118211 526 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm11746-201ENSMUST00000119843 821 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm13059-201ENSMUST00000119881 398 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm22339-201ENSMUST00000157718 62 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm24359-201ENSMUST00000158418 221 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm22548-201ENSMUST00000174899 78 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm5284-201ENSMUST00000199053 903 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm7554-201ENSMUST00000202282 574 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm44279-201ENSMUST00000205154 472 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 AC159242.1-201ENSMUST00000225832 194 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Gm26442-201ENSMUST00000082588 153 ntBASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ddx56Q9D0R4 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ddx56Q9D0R4 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ddx56Q9D0R4 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ddx56Q9D0R4 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ddx56Q9D0R4 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ddx56Q9D0R4 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ddx56Q9D0R4 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ddx56Q9D0R4 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.65□□□□□ -1.35
Ddx56Q9D0R4 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Ddx56Q9D0R4 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ddx56Q9D0R4 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.65□□□□□ -1.35
Ddx56Q9D0R4 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.65□□□□□ -1.35
Ddx56Q9D0R4 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Robo2-210ENSMUST00000226478 8059 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm23894-201ENSMUST00000158107 313 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm25374-201ENSMUST00000158158 101 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm23819-201ENSMUST00000158744 109 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm24735-201ENSMUST00000158859 118 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm6264-201ENSMUST00000160802 624 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm16297-201ENSMUST00000161466 459 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.64□□□□□ -1.35
Ddx56Q9D0R4 Gm37709-201ENSMUST00000195074 600 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms