Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm20486-201ENSMUST00000101544 128 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm4234-201ENSMUST00000119747 714 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm16139-201ENSMUST00000160015 420 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm27219-201ENSMUST00000184633 742 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm37609-201ENSMUST00000191778 678 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm38131-201ENSMUST00000192449 430 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm44463-201ENSMUST00000198895 137 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm42886-201ENSMUST00000199214 466 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm18290-201ENSMUST00000202900 844 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm44251-201ENSMUST00000204963 442 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 AC123658.1-201ENSMUST00000228364 867 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Smc1aQ9CU62 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm22372-201ENSMUST00000104589 136 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm12193-201ENSMUST00000117250 379 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm13641-201ENSMUST00000117993 473 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm8855-201ENSMUST00000118888 878 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm24239-201ENSMUST00000157791 255 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm6472-201ENSMUST00000178147 651 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm38181-201ENSMUST00000181357 720 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm28080-201ENSMUST00000188552 722 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm37187-201ENSMUST00000193425 341 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm44487-201ENSMUST00000205145 325 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Olfr1143-201ENSMUST00000090708 945 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Smc1aQ9CU62 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.61□□□□□ -1.35
Smc1aQ9CU62 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms