Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Use1Q9CQ56 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Pramel-201ENSMUST00000118979 1383 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm22499-201ENSMUST00000104501 135 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm12077-201ENSMUST00000117049 364 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm13702-201ENSMUST00000118542 825 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm8317-201ENSMUST00000121261 471 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm13531-201ENSMUST00000121893 543 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm15237-201ENSMUST00000122104 469 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm14747-201ENSMUST00000149888 984 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm6264-201ENSMUST00000160802 624 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm44623-201ENSMUST00000207934 434 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm5055-201ENSMUST00000215697 581 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm3266-201ENSMUST00000217832 591 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm7413-201ENSMUST00000219498 462 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm18405-201ENSMUST00000220743 511 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm18620-201ENSMUST00000222295 324 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Use1Q9CQ56 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 AC101205.1-201ENSMUST00000227916 907 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm24200-201ENSMUST00000082955 157 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.48□□□□□ -1.53
Use1Q9CQ56 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Use1Q9CQ56 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm12439-201ENSMUST00000117162 365 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm9671-201ENSMUST00000171502 547 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm5734-201ENSMUST00000189787 913 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm18427-201ENSMUST00000195422 515 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm42708-201ENSMUST00000196332 905 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm19104-201ENSMUST00000198392 679 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm42646-201ENSMUST00000202233 914 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm18839-201ENSMUST00000204292 670 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.47□□□□□ -1.53
Use1Q9CQ56 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.47□□□□□ -1.53
Use1Q9CQ56 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 AC123658.1-201ENSMUST00000228364 867 ntBASIC5.47□□□□□ -1.53
Use1Q9CQ56 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms