Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm7974-201ENSMUST00000117154 408 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm12770-201ENSMUST00000121734 462 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm9672-201ENSMUST00000166437 425 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm25120-201ENSMUST00000180148 79 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Mir6337-201ENSMUST00000184194 105 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm35323-201ENSMUST00000191836 499 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm7270-201ENSMUST00000195818 1128 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm43929-201ENSMUST00000203025 409 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm20997-201ENSMUST00000205148 231 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm19182-201ENSMUST00000207139 577 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm19709-201ENSMUST00000215403 482 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm18228-201ENSMUST00000217297 1091 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 AC156803.1-201ENSMUST00000224407 820 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 CT571256.1-201ENSMUST00000226045 585 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm6887-201ENSMUST00000080945 482 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm9894-201ENSMUST00000171257 2904 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Gm18493-201ENSMUST00000192084 1612 ntBASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim11Q99PQ2 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm14904-201ENSMUST00000117067 335 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm13265-201ENSMUST00000118090 421 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm15971-201ENSMUST00000119372 211 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm13121-201ENSMUST00000120637 632 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm22728-201ENSMUST00000158087 129 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm23852-201ENSMUST00000158376 77 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm20615-201ENSMUST00000177503 705 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm27659-201ENSMUST00000183472 98 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm27152-201ENSMUST00000183828 99 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm28739-201ENSMUST00000185415 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm28219-201ENSMUST00000185452 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm28542-201ENSMUST00000185545 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm28303-201ENSMUST00000185642 747 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm29244-201ENSMUST00000185825 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm29437-201ENSMUST00000185865 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm29412-201ENSMUST00000185869 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm28910-201ENSMUST00000185921 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm28812-201ENSMUST00000185963 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm29468-201ENSMUST00000185978 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm28854-201ENSMUST00000186218 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm28636-201ENSMUST00000186353 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm28452-201ENSMUST00000186623 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm29298-201ENSMUST00000186704 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm28185-201ENSMUST00000186815 694 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm28227-201ENSMUST00000186862 696 ntBASIC7.62□□□□□ -1.19
Trim11Q99PQ2 Gm28796-201ENSMUST00000186905 696 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms