Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm12636-201ENSMUST00000117395 624 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm23259-201ENSMUST00000158318 303 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm22698-201ENSMUST00000175375 108 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm6472-201ENSMUST00000178147 651 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm27024-201ENSMUST00000182561 755 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm29073-201ENSMUST00000185563 664 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm29165-201ENSMUST00000190655 664 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm29211-201ENSMUST00000191470 664 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RtcbQ99LF4 AC115047.1-201ENSMUST00000213795 322 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC8.03□□□□□ -1.12
RtcbQ99LF4 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC8.03□□□□□ -1.12
RtcbQ99LF4 AC079644.3-201ENSMUST00000222452 357 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm6195-201ENSMUST00000063059 357 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
RtcbQ99LF4 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm25586-201ENSMUST00000082499 112 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm22043-201ENSMUST00000082993 158 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm37114-201ENSMUST00000195065 1804 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RtcbQ99LF4 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm7205-201ENSMUST00000196032 1323 ntBASIC8.03□□□□□ -1.12
RtcbQ99LF4 Gm44242-201ENSMUST00000204212 2721 ntBASIC8.02□□□□□ -1.12
RtcbQ99LF4 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm15011-201ENSMUST00000117724 1480 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm20486-201ENSMUST00000101544 128 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 Mir708-201ENSMUST00000102189 109 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm15073-201ENSMUST00000117432 634 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm26933-201ENSMUST00000182320 827 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm8035-201ENSMUST00000204625 687 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 AC162467.1-201ENSMUST00000220254 621 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 AC156037.1-201ENSMUST00000221133 127 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 AC166358.6-201ENSMUST00000221834 1206 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 AC124356.2-201ENSMUST00000221874 336 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 AC125543.3-201ENSMUST00000221991 126 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 CT571256.1-201ENSMUST00000226045 585 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 AC122393.2-201ENSMUST00000226404 1093 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm25739-201ENSMUST00000082886 107 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm42507-201ENSMUST00000201187 2555 ntBASIC8.02□□□□□ -1.13
RtcbQ99LF4 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
RtcbQ99LF4 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RtcbQ99LF4 AC138284.1-201ENSMUST00000214258 3236 ntBASIC8.01□□□□□ -1.13
RtcbQ99LF4 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms