Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm23768-201ENSMUST00000104440 131 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm14621-201ENSMUST00000117709 689 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm12937-201ENSMUST00000118333 448 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm13604-201ENSMUST00000119332 482 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm23674-201ENSMUST00000157473 131 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm24198-201ENSMUST00000157812 108 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm6264-201ENSMUST00000160802 624 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm22642-201ENSMUST00000175352 252 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Mir1264-201ENSMUST00000175381 86 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm27601-201ENSMUST00000184794 127 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm7804-202ENSMUST00000194187 854 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm43005-201ENSMUST00000199015 648 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm44727-201ENSMUST00000204225 451 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 CT030030.1-201ENSMUST00000218809 152 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 AC124569.4-201ENSMUST00000223830 1220 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 AC154738.2-201ENSMUST00000227403 1110 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm9788-201ENSMUST00000057038 906 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm29486-201ENSMUST00000088648 372 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.06□□□□□ -1.44
Clrn1Q8K445 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
Clrn1Q8K445 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm9836-201ENSMUST00000117132 216 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Defa-ps1-201ENSMUST00000119062 282 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm11708-201ENSMUST00000119530 832 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm14863-201ENSMUST00000119648 307 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm16511-201ENSMUST00000120019 564 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Defa-ps6-201ENSMUST00000122172 282 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm15116-201ENSMUST00000122248 663 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm6650-201ENSMUST00000166710 614 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm4202-201ENSMUST00000169025 733 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm23632-201ENSMUST00000175289 125 ntBASIC6.05□□□□□ -1.44
Clrn1Q8K445 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clrn1Q8K445 Mir6367-201ENSMUST00000183385 102 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms