Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 Gm25515-201ENSMUST00000083858 157 ntBASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Prpf39Q8K2Z2 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm13772-201ENSMUST00000118431 317 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm14783-201ENSMUST00000118900 663 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm25782-201ENSMUST00000122526 289 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm25826-201ENSMUST00000157090 137 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Mir1945-201ENSMUST00000157919 78 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm15970-201ENSMUST00000160623 834 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm20453-201ENSMUST00000173968 226 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm18698-201ENSMUST00000192327 668 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm42646-201ENSMUST00000202233 914 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm8523-201ENSMUST00000211386 552 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm23502-201ENSMUST00000083902 145 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Prpf39Q8K2Z2 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm20486-201ENSMUST00000101544 128 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm24709-201ENSMUST00000104123 132 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm12099-201ENSMUST00000118660 750 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm11902-201ENSMUST00000118849 270 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm6620-201ENSMUST00000120113 715 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm12488-201ENSMUST00000122449 499 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm26106-201ENSMUST00000157254 228 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm10177-201ENSMUST00000160052 444 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm8930-201ENSMUST00000201693 768 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm44607-201ENSMUST00000205611 1090 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm44623-201ENSMUST00000207934 434 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Gm45850-201ENSMUST00000212536 338 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 AC131117.1-201ENSMUST00000225154 1171 ntBASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Prpf39Q8K2Z2 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms