Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm24069-201ENSMUST00000104512 127 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm14539-201ENSMUST00000117527 174 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm4234-201ENSMUST00000119747 714 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm15696-201ENSMUST00000121730 445 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm20480-201ENSMUST00000173953 250 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm27998-201ENSMUST00000184902 361 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm5694-201ENSMUST00000195648 641 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm5886-202ENSMUST00000203957 522 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm19073-201ENSMUST00000219978 555 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm4012-201ENSMUST00000221504 581 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 AC153794.2-201ENSMUST00000222650 550 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm5229-201ENSMUST00000039375 354 ntBASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc40Q8BI79 Gm43426-201ENSMUST00000197287 2597 ntBASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Gm13768-201ENSMUST00000116469 929 ntBASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Gm11609-201ENSMUST00000121926 793 ntBASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Gm25219-201ENSMUST00000157545 330 ntBASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Gm24155-201ENSMUST00000175259 110 ntBASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Mir6362-201ENSMUST00000184329 107 ntBASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Gm18799-201ENSMUST00000189104 913 ntBASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Gm37781-201ENSMUST00000194773 3218 ntBASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc40Q8BI79 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm37180-201ENSMUST00000195335 2819 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm42905-201ENSMUST00000196237 1611 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 CT009733.2-202ENSMUST00000224171 4748 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm11271-201ENSMUST00000116054 440 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm14610-201ENSMUST00000118358 966 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm7700-201ENSMUST00000120273 970 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm12308-201ENSMUST00000120440 389 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm26353-201ENSMUST00000158224 255 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm22428-201ENSMUST00000158554 132 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Gm25048-201ENSMUST00000158598 91 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.18□□□□□ -1.42
Ccdc40Q8BI79 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 117.8 ms