Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Gm15400-201ENSMUST00000118944 601 ntBASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Gm12654-201ENSMUST00000120387 587 ntBASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Gm6175-201ENSMUST00000121351 400 ntBASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.76□□□□□ -1.33
Nup98Q6PFD9 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm6134-201ENSMUST00000117265 171 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm15152-201ENSMUST00000121540 394 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Mir1945-201ENSMUST00000157919 78 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm37436-201ENSMUST00000193842 1085 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm4374-201ENSMUST00000204929 424 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm45660-201ENSMUST00000210267 151 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm18541-201ENSMUST00000215935 538 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Nup98Q6PFD9 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm23839-201ENSMUST00000116957 109 ntBASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm12808-201ENSMUST00000120597 404 ntBASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm25291-201ENSMUST00000122795 144 ntBASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm26170-201ENSMUST00000158419 148 ntBASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Mir6903-201ENSMUST00000183597 88 ntBASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Mir7087-201ENSMUST00000184840 70 ntBASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm44184-201ENSMUST00000204290 132 ntBASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Nup98Q6PFD9 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.74□□□□□ -1.33
Nup98Q6PFD9 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms