Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm7850-201ENSMUST00000212909 712 ntBASIC5.89□□□□□ -1.47
Foxc1Q61572 Gm5173-201ENSMUST00000219616 950 ntBASIC5.89□□□□□ -1.47
Foxc1Q61572 Gm8153-201ENSMUST00000219844 952 ntBASIC5.89□□□□□ -1.47
Foxc1Q61572 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC5.89□□□□□ -1.47
Foxc1Q61572 AC123058.1-201ENSMUST00000223748 437 ntBASIC5.89□□□□□ -1.47
Foxc1Q61572 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Foxc1Q61572 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.89□□□□□ -1.47
Foxc1Q61572 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Foxc1Q61572 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC5.89□□□□□ -1.47
Foxc1Q61572 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Foxc1Q61572 Snord38a-201ENSMUST00000083746 71 ntBASIC5.89□□□□□ -1.47
Foxc1Q61572 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Foxc1Q61572 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Foxc1Q61572 Gm43775-201ENSMUST00000201019 3395 ntBASIC5.89□□□□□ -1.47
Foxc1Q61572 Fgr-201ENSMUST00000030693 3363 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Foxc1Q61572 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC5.89□□□□□ -1.47
Foxc1Q61572 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Foxc1Q61572 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Foxc1Q61572 Gm6786-201ENSMUST00000203165 1915 ntBASIC5.89□□□□□ -1.47
Foxc1Q61572 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Foxc1Q61572 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Foxc1Q61572 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC5.89□□□□□ -1.47
Foxc1Q61572 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Foxc1Q61572 Gm42546-201ENSMUST00000201584 2592 ntBASIC5.89□□□□□ -1.47
Foxc1Q61572 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.89□□□□□ -1.47
Foxc1Q61572 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Foxc1Q61572 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Foxc1Q61572 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Foxc1Q61572 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Foxc1Q61572 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Foxc1Q61572 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Foxc1Q61572 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm43924-201ENSMUST00000204851 1736 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Foxc1Q61572 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Foxc1Q61572 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Fbxo3-203ENSMUST00000111135 3740 ntTSL 5 BASIC5.88□□□□□ -1.47
Foxc1Q61572 Mir683-2-201ENSMUST00000102099 109 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm25762-201ENSMUST00000103984 132 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm23431-201ENSMUST00000104006 107 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.88□□□□□ -1.47
Foxc1Q61572 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm7091-201ENSMUST00000116438 586 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm15078-201ENSMUST00000118371 782 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm11784-201ENSMUST00000118568 474 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm12229-201ENSMUST00000120487 468 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm15989-201ENSMUST00000121895 498 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm8065-201ENSMUST00000164048 605 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm17097-201ENSMUST00000166414 714 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm17572-201ENSMUST00000171455 420 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Mir683-1-201ENSMUST00000179371 109 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm9569-201ENSMUST00000187492 787 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm29376-201ENSMUST00000189357 835 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm17970-201ENSMUST00000192199 685 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm32175-201ENSMUST00000193641 346 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm6123-201ENSMUST00000193658 1069 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Ighv12-1-201ENSMUST00000195542 329 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm2676-201ENSMUST00000207279 606 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm45850-201ENSMUST00000212536 338 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm20786-201ENSMUST00000212649 436 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.88□□□□□ -1.47
Foxc1Q61572 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm6885-201ENSMUST00000217261 372 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 CT033774.2-201ENSMUST00000222079 256 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm14267-208ENSMUST00000228324 1189 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC5.88□□□□□ -1.47
Foxc1Q61572 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Foxc1Q61572 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Foxc1Q61572 Cenpi-202ENSMUST00000101251 3085 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Gm3883-201ENSMUST00000098119 3229 ntBASIC5.88□□□□□ -1.47
Foxc1Q61572 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms