Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
ClpbQ60649 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.84□□□□□ -1.48
ClpbQ60649 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.84□□□□□ -1.48
ClpbQ60649 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
ClpbQ60649 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
ClpbQ60649 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
ClpbQ60649 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
ClpbQ60649 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.83□□□□□ -1.48
ClpbQ60649 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ClpbQ60649 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.83□□□□□ -1.48
ClpbQ60649 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Gm25564-201ENSMUST00000104604 132 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ClpbQ60649 Gm15078-201ENSMUST00000118371 782 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Gm8317-201ENSMUST00000121261 471 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Gm15780-201ENSMUST00000121283 935 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.83□□□□□ -1.48
ClpbQ60649 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.83□□□□□ -1.48
ClpbQ60649 Gm4660-201ENSMUST00000131499 403 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Gm15279-201ENSMUST00000155593 288 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Gm23896-201ENSMUST00000158109 130 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Gm20778-201ENSMUST00000178524 627 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
ClpbQ60649 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Gm4332-201ENSMUST00000196114 346 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Gm43974-201ENSMUST00000205080 684 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
ClpbQ60649 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.83□□□□□ -1.48
ClpbQ60649 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Gm9237-201ENSMUST00000221499 548 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Olfr844-201ENSMUST00000054106 930 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ClpbQ60649 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ClpbQ60649 Desi2-202ENSMUST00000069568 1193 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.83□□□□□ -1.48
ClpbQ60649 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ClpbQ60649 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ClpbQ60649 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ClpbQ60649 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ClpbQ60649 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ClpbQ60649 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
ClpbQ60649 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ClpbQ60649 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ClpbQ60649 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ClpbQ60649 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ClpbQ60649 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.82□□□□□ -1.48
ClpbQ60649 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.82□□□□□ -1.48
ClpbQ60649 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.82□□□□□ -1.48
ClpbQ60649 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ClpbQ60649 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ClpbQ60649 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ClpbQ60649 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ClpbQ60649 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.82□□□□□ -1.48
ClpbQ60649 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.82□□□□□ -1.48
ClpbQ60649 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ClpbQ60649 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ClpbQ60649 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ClpbQ60649 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ClpbQ60649 Gm24709-201ENSMUST00000104123 132 ntBASIC5.82□□□□□ -1.48
ClpbQ60649 Gm13818-201ENSMUST00000119441 511 ntBASIC5.82□□□□□ -1.48
ClpbQ60649 Gm12399-201ENSMUST00000121475 446 ntBASIC5.82□□□□□ -1.48
ClpbQ60649 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ClpbQ60649 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ClpbQ60649 Gm22923-201ENSMUST00000174952 110 ntBASIC5.82□□□□□ -1.48
ClpbQ60649 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.82□□□□□ -1.48
ClpbQ60649 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.82□□□□□ -1.48
ClpbQ60649 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC5.82□□□□□ -1.48
ClpbQ60649 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ClpbQ60649 Gm37463-201ENSMUST00000193819 796 ntBASIC5.82□□□□□ -1.48
ClpbQ60649 Gm37838-201ENSMUST00000194464 312 ntBASIC5.82□□□□□ -1.48
ClpbQ60649 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms