Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm7867-201ENSMUST00000189856 546 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm29490-201ENSMUST00000190923 342 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm42824-201ENSMUST00000199361 247 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm43631-201ENSMUST00000202011 369 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 AC162183.1-202ENSMUST00000225434 904 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm43429-201ENSMUST00000197889 2251 ntBASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim41Q5NCC3 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm26384-201ENSMUST00000102183 110 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm26156-201ENSMUST00000116999 123 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm14783-201ENSMUST00000118900 663 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm15060-201ENSMUST00000119550 948 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm7916-201ENSMUST00000120325 456 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm14784-201ENSMUST00000121604 663 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm22024-201ENSMUST00000122733 287 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm26410-201ENSMUST00000157670 261 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm20773-201ENSMUST00000178940 681 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm29216-201ENSMUST00000187117 492 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Igkv15-97-201ENSMUST00000197637 339 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm5154-201ENSMUST00000203971 399 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm18215-201ENSMUST00000204429 798 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm8526-201ENSMUST00000079153 475 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 n-R5s95-201ENSMUST00000082684 118 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm24451-201ENSMUST00000083353 133 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 AC165260.6-205ENSMUST00000224190 9762 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm5841-201ENSMUST00000195307 2177 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Gm7739-201ENSMUST00000221131 1560 ntBASIC12.35□□□□□ -0.43
Trim41Q5NCC3 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm16400-201ENSMUST00000116523 1029 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm8812-201ENSMUST00000118496 412 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm14601-201ENSMUST00000120892 236 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm12881-201ENSMUST00000121191 203 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm25395-201ENSMUST00000157343 272 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm23806-201ENSMUST00000175157 109 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 S100a11-ps-201ENSMUST00000181735 306 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm28787-201ENSMUST00000188357 696 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm29559-201ENSMUST00000189412 696 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm28165-201ENSMUST00000190669 694 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm19089-201ENSMUST00000197207 613 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm2829-201ENSMUST00000213121 499 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Gm46192-201ENSMUST00000217894 326 ntBASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim41Q5NCC3 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms