Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm43613-201ENSMUST00000199409 1613 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm14893-201ENSMUST00000117904 282 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm26346-201ENSMUST00000157525 329 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm3140-201ENSMUST00000163523 481 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm22698-201ENSMUST00000175375 108 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm18417-201ENSMUST00000176564 648 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm18396-201ENSMUST00000177095 361 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm21241-201ENSMUST00000179551 934 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm26557-201ENSMUST00000180756 493 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Scgb2b33-201ENSMUST00000187413 334 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm2229-201ENSMUST00000193328 710 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm43655-201ENSMUST00000197367 222 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm3257-201ENSMUST00000207217 675 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 CT030030.1-201ENSMUST00000218809 152 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm5612-201ENSMUST00000053326 375 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 AW822073-201ENSMUST00000075305 555 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.3□□□□□ -1.08
Usp48Q3V0C5 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Usp48Q3V0C5 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 AC155234.1-201ENSMUST00000225610 2823 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm11256-201ENSMUST00000118109 829 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm15923-201ENSMUST00000119300 1169 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm11420-201ENSMUST00000120047 402 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm13462-201ENSMUST00000121472 961 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm15038-201ENSMUST00000122144 296 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm25052-201ENSMUST00000122661 158 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm9428-201ENSMUST00000127214 769 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Spanxn4-201ENSMUST00000172433 424 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm20401-201ENSMUST00000173717 212 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm28023-201ENSMUST00000184556 60 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm27825-201ENSMUST00000184586 60 ntBASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp48Q3V0C5 Gm29600-201ENSMUST00000188687 377 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms