Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm11533-201ENSMUST00000120287 477 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm9428-201ENSMUST00000127214 769 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm25065-201ENSMUST00000177914 132 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm25891-201ENSMUST00000180050 132 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm26923-201ENSMUST00000182615 996 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Mir6992-201ENSMUST00000183342 109 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm29519-201ENSMUST00000186994 398 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm21654-201ENSMUST00000188086 691 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm6693-201ENSMUST00000189583 813 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm38185-201ENSMUST00000193195 694 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm44494-201ENSMUST00000196760 129 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm44382-201ENSMUST00000198683 122 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm5735-201ENSMUST00000207053 167 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm9088-201ENSMUST00000220237 508 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm3800-201ENSMUST00000221086 554 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm8526-201ENSMUST00000079153 475 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm25515-201ENSMUST00000083858 157 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.79□□□□□ -1.48
Trafd1Q3UDK1 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Mir449c-201ENSMUST00000102192 109 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm25795-201ENSMUST00000104421 132 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm23225-201ENSMUST00000158121 114 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm24733-201ENSMUST00000158863 253 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm22650-201ENSMUST00000175138 105 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Mirt2-201ENSMUST00000175179 285 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm21399-201ENSMUST00000180210 597 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm28934-201ENSMUST00000186491 346 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm37072-201ENSMUST00000194570 837 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm36939-201ENSMUST00000194889 439 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm8523-201ENSMUST00000211386 552 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Trafd1Q3UDK1 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 118.2 ms