Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm25795-201ENSMUST00000104421 132 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm11447-201ENSMUST00000118983 858 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm14054-201ENSMUST00000120744 704 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Scarna10-201ENSMUST00000158992 325 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm6223-201ENSMUST00000178436 871 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm28066-201ENSMUST00000188657 472 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm37341-201ENSMUST00000194680 371 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm43033-201ENSMUST00000199682 425 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm43233-201ENSMUST00000200491 616 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm4032-201ENSMUST00000210886 487 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim43aQ3TL54 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm15715-201ENSMUST00000118032 283 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm13702-201ENSMUST00000118542 825 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm14842-201ENSMUST00000119577 269 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm22160-201ENSMUST00000158405 328 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm23386-201ENSMUST00000158585 144 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm17048-201ENSMUST00000179266 847 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm3351-201ENSMUST00000193454 505 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm4083-201ENSMUST00000207158 451 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Gm18247-201ENSMUST00000222937 601 ntBASIC6.17□□□□□ -1.42
Trim43aQ3TL54 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim43aQ3TL54 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms