Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox6P40645 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox6P40645 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sox6P40645 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.48□□□□□ -1.53
Sox6P40645 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.48□□□□□ -1.53
Sox6P40645 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
Sox6P40645 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox6P40645 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.47□□□□□ -1.53
Sox6P40645 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Sox6P40645 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.47□□□□□ -1.53
Sox6P40645 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.47□□□□□ -1.53
Sox6P40645 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.47□□□□□ -1.53
Sox6P40645 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
Sox6P40645 Gm29519-201ENSMUST00000186994 398 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Gm19087-201ENSMUST00000191430 946 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Gm18839-201ENSMUST00000204292 670 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.47□□□□□ -1.53
Sox6P40645 Gm5318-201ENSMUST00000205249 406 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Gm44539-201ENSMUST00000206010 238 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.47□□□□□ -1.53
Sox6P40645 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Sox6P40645 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Gm2614-201ENSMUST00000223227 403 ntBASIC5.47□□□□□ -1.53
Sox6P40645 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox6P40645 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.47□□□□□ -1.53
Sox6P40645 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Sox6P40645 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox6P40645 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Sox6P40645 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Sox6P40645 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.46□□□□□ -1.53
Sox6P40645 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sox6P40645 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Sox6P40645 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox6P40645 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox6P40645 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.46□□□□□ -1.54
Sox6P40645 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox6P40645 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox6P40645 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox6P40645 Gm6446-201ENSMUST00000120604 818 ntBASIC5.46□□□□□ -1.54
Sox6P40645 Gm14349-201ENSMUST00000137155 902 ntBASIC5.46□□□□□ -1.54
Sox6P40645 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox6P40645 Gm26346-201ENSMUST00000157525 329 ntBASIC5.46□□□□□ -1.54
Sox6P40645 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Sox6P40645 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.46□□□□□ -1.54
Sox6P40645 Gm20530-201ENSMUST00000174261 254 ntBASIC5.46□□□□□ -1.54
Sox6P40645 Gm24081-201ENSMUST00000175177 125 ntBASIC5.46□□□□□ -1.54
Sox6P40645 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox6P40645 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.46□□□□□ -1.54
Sox6P40645 Gm29464-201ENSMUST00000187692 513 ntBASIC5.46□□□□□ -1.54
Sox6P40645 Gm37784-201ENSMUST00000193233 189 ntBASIC5.46□□□□□ -1.54
Sox6P40645 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Sox6P40645 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.46□□□□□ -1.54
Sox6P40645 Gm43467-201ENSMUST00000197441 437 ntBASIC5.46□□□□□ -1.54
Sox6P40645 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.46□□□□□ -1.54
Sox6P40645 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox6P40645 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.46□□□□□ -1.54
Sox6P40645 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.46□□□□□ -1.54
Sox6P40645 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Sox6P40645 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms