Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC154634.3-201ENSMUST00000224589 736 ntBASIC6.94□□□□□ -1.3
Traf1P39428 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Traf1P39428 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Traf1P39428 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Traf1P39428 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Traf1P39428 Mir375-201ENSMUST00000083682 64 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Traf1P39428 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Traf1P39428 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.94□□□□□ -1.3
Traf1P39428 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Traf1P39428 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Traf1P39428 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Traf1P39428 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Traf1P39428 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Traf1P39428 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Traf1P39428 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.94□□□□□ -1.3
Traf1P39428 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Traf1P39428 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.94□□□□□ -1.3
Traf1P39428 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Traf1P39428 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Traf1P39428 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Traf1P39428 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Traf1P39428 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Traf1P39428 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.93□□□□□ -1.3
Traf1P39428 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.93□□□□□ -1.3
Traf1P39428 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Traf1P39428 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Traf1P39428 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.93□□□□□ -1.3
Traf1P39428 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Traf1P39428 Mir449c-201ENSMUST00000102192 109 ntBASIC6.93□□□□□ -1.3
Traf1P39428 Gm22372-201ENSMUST00000104589 136 ntBASIC6.93□□□□□ -1.3
Traf1P39428 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Traf1P39428 Gm11105-201ENSMUST00000112781 478 ntBASIC6.93□□□□□ -1.3
Traf1P39428 Gm13013-201ENSMUST00000119087 523 ntBASIC6.93□□□□□ -1.3
Traf1P39428 Gm21772-201ENSMUST00000169213 478 ntBASIC6.93□□□□□ -1.3
Traf1P39428 Gm17126-201ENSMUST00000172276 523 ntBASIC6.93□□□□□ -1.3
Traf1P39428 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Traf1P39428 Gm27160-201ENSMUST00000184837 199 ntBASIC6.93□□□□□ -1.3
Traf1P39428 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.93□□□□□ -1.3
Traf1P39428 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.93□□□□□ -1.3
Traf1P39428 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Traf1P39428 Gm5830-201ENSMUST00000049117 443 ntBASIC6.93□□□□□ -1.3
Traf1P39428 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Traf1P39428 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Traf1P39428 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Traf1P39428 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Traf1P39428 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.93□□□□□ -1.3
Traf1P39428 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Traf1P39428 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Traf1P39428 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Traf1P39428 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Traf1P39428 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.93□□□□□ -1.3
Traf1P39428 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
Traf1P39428 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.93□□□□□ -1.3
Traf1P39428 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Traf1P39428 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Traf1P39428 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.93□□□□□ -1.3
Traf1P39428 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Traf1P39428 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.93□□□□□ -1.3
Traf1P39428 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Traf1P39428 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Traf1P39428 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Traf1P39428 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Traf1P39428 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.92□□□□□ -1.3
Traf1P39428 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Traf1P39428 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Gm13770-201ENSMUST00000117149 305 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Gm14842-201ENSMUST00000119577 269 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Gm15335-201ENSMUST00000122442 411 ntBASIC6.92□□□□□ -1.3
Traf1P39428 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.92□□□□□ -1.3
Traf1P39428 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Traf1P39428 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.92□□□□□ -1.3
Traf1P39428 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.92□□□□□ -1.3
Traf1P39428 Gm23954-201ENSMUST00000157213 353 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Gm23539-201ENSMUST00000157537 224 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Gm23553-201ENSMUST00000157817 295 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Gm22724-201ENSMUST00000158091 127 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Traf1P39428 Gm9671-201ENSMUST00000171502 547 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Mir5125-201ENSMUST00000175240 79 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Gm20561-201ENSMUST00000188131 292 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.92□□□□□ -1.3
Traf1P39428 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Mir6906-201ENSMUST00000198998 58 ntBASIC6.92□□□□□ -1.3
Traf1P39428 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Traf1P39428 Gm44768-201ENSMUST00000205719 393 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms