Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm3242-201ENSMUST00000171273 485 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC5.94□□□□□ -1.46
Lire1P11260 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC5.94□□□□□ -1.46
Lire1P11260 Gm27044-201ENSMUST00000183033 796 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm28023-201ENSMUST00000184556 60 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm27825-201ENSMUST00000184586 60 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm27653-201ENSMUST00000185037 136 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm28620-201ENSMUST00000190463 439 ntBASIC5.94□□□□□ -1.46
Lire1P11260 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm8190-201ENSMUST00000199603 586 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm9038-201ENSMUST00000203400 604 ntBASIC5.94□□□□□ -1.46
Lire1P11260 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.94□□□□□ -1.46
Lire1P11260 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.94□□□□□ -1.46
Lire1P11260 Gm44538-201ENSMUST00000205615 348 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm4548-201ENSMUST00000208487 509 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.94□□□□□ -1.46
Lire1P11260 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Olfr809-203ENSMUST00000218237 1100 ntBASIC5.94□□□□□ -1.46
Lire1P11260 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Lire1P11260 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Lire1P11260 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Lire1P11260 Gm23238-201ENSMUST00000083007 164 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm7731-201ENSMUST00000091759 470 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.94□□□□□ -1.46
Lire1P11260 Gm37124-201ENSMUST00000192140 1992 ntBASIC5.94□□□□□ -1.46
Lire1P11260 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.94□□□□□ -1.46
Lire1P11260 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Lire1P11260 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.94□□□□□ -1.46
Lire1P11260 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Lire1P11260 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Gm43128-201ENSMUST00000202212 1621 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Lire1P11260 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Lire1P11260 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Lire1P11260 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Gm12683-201ENSMUST00000117528 415 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.93□□□□□ -1.46
Lire1P11260 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.93□□□□□ -1.46
Lire1P11260 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.93□□□□□ -1.46
Lire1P11260 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.93□□□□□ -1.46
Lire1P11260 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Gm24690-201ENSMUST00000157759 97 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Gm8837-201ENSMUST00000161037 1107 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Gm27804-201ENSMUST00000185135 119 ntBASIC5.93□□□□□ -1.46
Lire1P11260 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Gm18849-201ENSMUST00000189861 560 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Gm37682-201ENSMUST00000191776 522 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Gm36448-201ENSMUST00000199916 438 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Gm3148-201ENSMUST00000203594 612 ntBASIC5.93□□□□□ -1.46
Lire1P11260 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Lire1P11260 Gm45156-201ENSMUST00000207255 439 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Gm4574-201ENSMUST00000207804 542 ntBASIC5.93□□□□□ -1.46
Lire1P11260 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Gm4032-201ENSMUST00000210886 487 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Gm45485-201ENSMUST00000211229 357 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC5.93□□□□□ -1.46
Lire1P11260 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC5.93□□□□□ -1.46
Lire1P11260 AC154851.2-201ENSMUST00000222172 644 ntBASIC5.93□□□□□ -1.46
Lire1P11260 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Gm18247-201ENSMUST00000222937 601 ntBASIC5.93□□□□□ -1.46
Lire1P11260 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.93□□□□□ -1.46
Lire1P11260 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.93□□□□□ -1.46
Lire1P11260 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Lire1P11260 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Lire1P11260 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Lire1P11260 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Lire1P11260 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Lire1P11260 Gm9575-201ENSMUST00000122140 1339 ntBASIC5.93□□□□□ -1.46
Lire1P11260 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 183 ms