Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Hoxd3P09027 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm37159-201ENSMUST00000192720 3605 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm6767-201ENSMUST00000118650 1381 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm37956-201ENSMUST00000195208 2010 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Hoxd3P09027 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Hoxd3P09027 Gm43623-201ENSMUST00000199289 2663 ntBASIC6.02□□□□□ -1.44
Hoxd3P09027 Gm43618-201ENSMUST00000197392 3451 ntBASIC6.02□□□□□ -1.44
Hoxd3P09027 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm44424-201ENSMUST00000203438 1826 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm45534-201ENSMUST00000211449 2339 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC6.02□□□□□ -1.45
Hoxd3P09027 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm6490-201ENSMUST00000111862 461 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm13858-201ENSMUST00000118862 671 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm12891-201ENSMUST00000119358 240 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm13170-201ENSMUST00000119716 643 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm4487-201ENSMUST00000150617 442 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm4835-201ENSMUST00000155839 972 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm24059-201ENSMUST00000157493 312 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm23579-201ENSMUST00000158528 103 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm15974-201ENSMUST00000159103 531 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm8164-201ENSMUST00000169120 1192 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm10074-201ENSMUST00000174543 249 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm26556-201ENSMUST00000180645 320 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm4545-201ENSMUST00000190797 603 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm7341-201ENSMUST00000192183 926 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Hoxd3P09027 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm43114-201ENSMUST00000198298 343 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm42760-201ENSMUST00000199814 311 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm7542-201ENSMUST00000201140 777 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm44923-201ENSMUST00000206673 85 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm33178-201ENSMUST00000212090 257 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm6885-201ENSMUST00000217261 372 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Hoxd3P09027 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Gm35558-203ENSMUST00000222264 204 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 AC138604.2-201ENSMUST00000226620 921 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 AC130673.1-201ENSMUST00000227992 435 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hoxd3P09027 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hoxd3P09027 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hoxd3P09027 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hoxd3P09027 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hoxd3P09027 n-R5s79-201ENSMUST00000083071 120 ntBASIC6.02□□□□□ -1.45
Hoxd3P09027 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms