Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hmgb3O54879 AC122459.2-201ENSMUST00000227099 638 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 AC122937.2-201ENSMUST00000228258 1051 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
Hmgb3O54879 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hmgb3O54879 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Hmgb3O54879 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Hmgb3O54879 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm42873-201ENSMUST00000196110 1726 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Hmgb3O54879 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Hmgb3O54879 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Hmgb3O54879 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Hmgb3O54879 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Hmgb3O54879 AC144733.2-201ENSMUST00000222552 2292 ntBASIC4.65□□□□□ -1.66
Hmgb3O54879 Gm43437-201ENSMUST00000198535 3955 ntBASIC4.65□□□□□ -1.66
Hmgb3O54879 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm22952-201ENSMUST00000116720 120 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm13770-201ENSMUST00000117149 305 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm7613-201ENSMUST00000139070 487 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm18006-201ENSMUST00000177411 662 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm28066-201ENSMUST00000188657 472 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm5575-201ENSMUST00000190879 398 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm38177-201ENSMUST00000192213 1040 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm37716-201ENSMUST00000193553 947 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm8930-201ENSMUST00000201693 768 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm18559-201ENSMUST00000208249 604 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm45343-201ENSMUST00000210452 828 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC4.65□□□□□ -1.67
Hmgb3O54879 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm32526-201ENSMUST00000221878 981 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 Gm9267-201ENSMUST00000222831 404 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 AC139197.1-201ENSMUST00000228332 813 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.65□□□□□ -1.67
Hmgb3O54879 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
Hmgb3O54879 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Hmgb3O54879 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm13768-201ENSMUST00000116469 929 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm12850-201ENSMUST00000119210 436 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm14842-201ENSMUST00000119577 269 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm12101-201ENSMUST00000121590 390 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm11200-201ENSMUST00000121698 448 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm8323-201ENSMUST00000168436 1201 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm17198-201ENSMUST00000171792 1154 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm18953-201ENSMUST00000175694 300 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm4904-201ENSMUST00000178243 1195 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm2871-201ENSMUST00000179984 1204 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm7713-201ENSMUST00000181201 1007 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm29464-201ENSMUST00000187692 513 ntBASIC4.64□□□□□ -1.67
Hmgb3O54879 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC4.64□□□□□ -1.67
Hmgb3O54879 Gm37719-201ENSMUST00000194615 292 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms