Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm9575-201ENSMUST00000122140 1339 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm22231-201ENSMUST00000101027 73 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm22267-201ENSMUST00000104008 131 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm26422-201ENSMUST00000104276 132 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm22103-201ENSMUST00000116733 121 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm26475-201ENSMUST00000116769 121 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm23620-201ENSMUST00000116812 121 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm25042-201ENSMUST00000116856 121 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm25540-201ENSMUST00000116880 121 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm15016-201ENSMUST00000117300 720 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm14733-201ENSMUST00000117680 133 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm14116-201ENSMUST00000117733 805 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm6654-201ENSMUST00000118950 348 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm14098-201ENSMUST00000119295 623 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm12929-201ENSMUST00000122406 370 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm16112-201ENSMUST00000159075 382 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CtcflA2APF3 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CtcflA2APF3 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm24103-201ENSMUST00000174930 77 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
CtcflA2APF3 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm23550-201ENSMUST00000179003 121 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm25123-201ENSMUST00000179154 121 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm25353-201ENSMUST00000179366 121 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm22992-201ENSMUST00000179496 121 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm25892-201ENSMUST00000179867 121 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm24092-201ENSMUST00000180257 121 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CtcflA2APF3 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm20128-201ENSMUST00000196189 417 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm5050-201ENSMUST00000197164 775 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm43576-201ENSMUST00000197937 871 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm42458-201ENSMUST00000201914 369 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm46364-201ENSMUST00000218548 319 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC5.34□□□□□ -1.55
CtcflA2APF3 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm18405-201ENSMUST00000220743 511 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CtcflA2APF3 AC123665.3-201ENSMUST00000228735 1216 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm25133-201ENSMUST00000082647 130 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Snora30-201ENSMUST00000083325 130 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CtcflA2APF3 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CtcflA2APF3 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.34□□□□□ -1.55
CtcflA2APF3 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.34□□□□□ -1.55
CtcflA2APF3 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.56
CtcflA2APF3 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CtcflA2APF3 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CtcflA2APF3 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CtcflA2APF3 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.33□□□□□ -1.56
CtcflA2APF3 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm23979-201ENSMUST00000104071 128 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm11970-201ENSMUST00000116105 320 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm12653-201ENSMUST00000117778 561 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm13835-201ENSMUST00000118459 685 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm5793-201ENSMUST00000119393 630 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm13818-201ENSMUST00000119441 511 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm11370-201ENSMUST00000120583 260 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm3810-201ENSMUST00000122413 476 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CtcflA2APF3 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm24682-201ENSMUST00000158764 137 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm8032-201ENSMUST00000171009 574 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm24155-201ENSMUST00000175259 110 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm8581-201ENSMUST00000188636 890 ntBASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CtcflA2APF3 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms