Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H2afb3S4R1G7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb3S4R1G7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb3S4R1G7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Tgds-204ENSMUST00000228543 1594 ntBASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb3S4R1G7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Gm22325-201ENSMUST00000158904 308 ntBASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Gm6420-201ENSMUST00000193885 723 ntBASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb3S4R1G7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms