Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.12■□□□□ 0.49
Scn8aQ9WTU3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Scn8aQ9WTU3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.12■□□□□ 0.49
Scn8aQ9WTU3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn8aQ9WTU3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn8aQ9WTU3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn8aQ9WTU3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn8aQ9WTU3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn8aQ9WTU3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.12■□□□□ 0.49
Scn8aQ9WTU3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn8aQ9WTU3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.1■□□□□ 0.49
Scn8aQ9WTU3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Gm43799-201ENSMUST00000201845 579 ntBASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Gm5417-201ENSMUST00000079706 384 ntBASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn8aQ9WTU3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn8aQ9WTU3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn8aQ9WTU3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn8aQ9WTU3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn8aQ9WTU3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn8aQ9WTU3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.08■□□□□ 0.49
Scn8aQ9WTU3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn8aQ9WTU3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn8aQ9WTU3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scn8aQ9WTU3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.08■□□□□ 0.49
Scn8aQ9WTU3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn8aQ9WTU3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn8aQ9WTU3 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.08■□□□□ 0.48
Scn8aQ9WTU3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Scn8aQ9WTU3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Scn8aQ9WTU3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 Odf3b-204ENSMUST00000227834 930 ntBASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn8aQ9WTU3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.06■□□□□ 0.48
Scn8aQ9WTU3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Scn8aQ9WTU3 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.06■□□□□ 0.48
Scn8aQ9WTU3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn8aQ9WTU3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn8aQ9WTU3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Scn8aQ9WTU3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scn8aQ9WTU3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn8aQ9WTU3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn8aQ9WTU3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn8aQ9WTU3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn8aQ9WTU3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms