Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup50Q9JIH2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup50Q9JIH2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup50Q9JIH2 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.95■□□□□ 0.62
Nup50Q9JIH2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.95■□□□□ 0.62
Nup50Q9JIH2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup50Q9JIH2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.95■□□□□ 0.62
Nup50Q9JIH2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nup50Q9JIH2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.95■□□□□ 0.62
Nup50Q9JIH2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Gm7290-201ENSMUST00000104990 617 ntBASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Gm12918-201ENSMUST00000120234 636 ntBASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Gm15710-201ENSMUST00000121821 636 ntBASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Gm5075-201ENSMUST00000196916 622 ntBASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup50Q9JIH2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Gm6211-202ENSMUST00000167849 925 ntBASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup50Q9JIH2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nup50Q9JIH2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup50Q9JIH2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup50Q9JIH2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup50Q9JIH2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nup50Q9JIH2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.92■□□□□ 0.62
Nup50Q9JIH2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nup50Q9JIH2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Nup50Q9JIH2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.92■□□□□ 0.62
Nup50Q9JIH2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.92■□□□□ 0.62
Nup50Q9JIH2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup50Q9JIH2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup50Q9JIH2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.92■□□□□ 0.62
Nup50Q9JIH2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nup50Q9JIH2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Gm38285-201ENSMUST00000192928 922 ntBASIC18.9■□□□□ 0.62
Nup50Q9JIH2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nup50Q9JIH2 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.89■□□□□ 0.62
Nup50Q9JIH2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nup50Q9JIH2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nup50Q9JIH2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nup50Q9JIH2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nup50Q9JIH2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nup50Q9JIH2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nup50Q9JIH2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.89■□□□□ 0.61
Nup50Q9JIH2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nup50Q9JIH2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms