Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.54■□□□□ 0.88
Col4a3bpQ9EQG9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Col4a3bpQ9EQG9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.54■□□□□ 0.88
Col4a3bpQ9EQG9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a3bpQ9EQG9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a3bpQ9EQG9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Col4a3bpQ9EQG9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a3bpQ9EQG9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.53■□□□□ 0.88
Col4a3bpQ9EQG9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a3bpQ9EQG9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a3bpQ9EQG9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a3bpQ9EQG9 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.53■□□□□ 0.88
Col4a3bpQ9EQG9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Col4a3bpQ9EQG9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a3bpQ9EQG9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a3bpQ9EQG9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.53■□□□□ 0.88
Col4a3bpQ9EQG9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.53■□□□□ 0.88
Col4a3bpQ9EQG9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a3bpQ9EQG9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a3bpQ9EQG9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a3bpQ9EQG9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a3bpQ9EQG9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a3bpQ9EQG9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a3bpQ9EQG9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Col4a3bpQ9EQG9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a3bpQ9EQG9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Col4a3bpQ9EQG9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.52■□□□□ 0.88
Col4a3bpQ9EQG9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a3bpQ9EQG9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a3bpQ9EQG9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a3bpQ9EQG9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.52■□□□□ 0.87
Col4a3bpQ9EQG9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col4a3bpQ9EQG9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col4a3bpQ9EQG9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a3bpQ9EQG9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.5■□□□□ 0.87
Col4a3bpQ9EQG9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a3bpQ9EQG9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a3bpQ9EQG9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a3bpQ9EQG9 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.5■□□□□ 0.87
Col4a3bpQ9EQG9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col4a3bpQ9EQG9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.5■□□□□ 0.87
Col4a3bpQ9EQG9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.5■□□□□ 0.87
Col4a3bpQ9EQG9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Gm8969-201ENSMUST00000199694 526 ntBASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col4a3bpQ9EQG9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.48■□□□□ 0.87
Col4a3bpQ9EQG9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a3bpQ9EQG9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col4a3bpQ9EQG9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms