Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap53Q9D439 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap53Q9D439 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap53Q9D439 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap53Q9D439 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap53Q9D439 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.68■□□□□ 0.74
Cfap53Q9D439 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap53Q9D439 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap53Q9D439 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Tgds-204ENSMUST00000228543 1594 ntBASIC19.67■□□□□ 0.74
Cfap53Q9D439 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap53Q9D439 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap53Q9D439 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap53Q9D439 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap53Q9D439 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap53Q9D439 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap53Q9D439 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap53Q9D439 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.66■□□□□ 0.74
Cfap53Q9D439 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cfap53Q9D439 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.66■□□□□ 0.74
Cfap53Q9D439 Rab3c-203ENSMUST00000224180 967 ntBASIC19.66■□□□□ 0.74
Cfap53Q9D439 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cfap53Q9D439 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap53Q9D439 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap53Q9D439 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap53Q9D439 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap53Q9D439 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.65■□□□□ 0.74
Cfap53Q9D439 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap53Q9D439 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cfap53Q9D439 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap53Q9D439 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap53Q9D439 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap53Q9D439 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap53Q9D439 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cfap53Q9D439 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap53Q9D439 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cfap53Q9D439 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.64■□□□□ 0.73
Cfap53Q9D439 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap53Q9D439 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap53Q9D439 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap53Q9D439 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap53Q9D439 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap53Q9D439 Gm2399-201ENSMUST00000104944 225 ntBASIC19.63■□□□□ 0.73
Cfap53Q9D439 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cfap53Q9D439 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.63■□□□□ 0.73
Cfap53Q9D439 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.63■□□□□ 0.73
Cfap53Q9D439 Gm44549-201ENSMUST00000208351 577 ntBASIC19.63■□□□□ 0.73
Cfap53Q9D439 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap53Q9D439 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap53Q9D439 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap53Q9D439 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap53Q9D439 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap53Q9D439 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap53Q9D439 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.62■□□□□ 0.73
Cfap53Q9D439 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap53Q9D439 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cfap53Q9D439 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap53Q9D439 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap53Q9D439 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap53Q9D439 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap53Q9D439 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.62■□□□□ 0.73
Cfap53Q9D439 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cfap53Q9D439 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap53Q9D439 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap53Q9D439 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap53Q9D439 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap53Q9D439 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap53Q9D439 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap53Q9D439 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.61■□□□□ 0.73
Cfap53Q9D439 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap53Q9D439 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap53Q9D439 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms