Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx29Q9D3S3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.75■□□□□ 0.75
Snx29Q9D3S3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx29Q9D3S3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx29Q9D3S3 Gm23634-201ENSMUST00000175071 91 ntBASIC19.75■□□□□ 0.75
Snx29Q9D3S3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx29Q9D3S3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx29Q9D3S3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Snx29Q9D3S3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Snx29Q9D3S3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx29Q9D3S3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx29Q9D3S3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx29Q9D3S3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snx29Q9D3S3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snx29Q9D3S3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Snx29Q9D3S3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx29Q9D3S3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx29Q9D3S3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.73■□□□□ 0.75
Snx29Q9D3S3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx29Q9D3S3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx29Q9D3S3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx29Q9D3S3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Snx29Q9D3S3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx29Q9D3S3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Snx29Q9D3S3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Snx29Q9D3S3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.72■□□□□ 0.75
Snx29Q9D3S3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx29Q9D3S3 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.72■□□□□ 0.75
Snx29Q9D3S3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx29Q9D3S3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snx29Q9D3S3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Snx29Q9D3S3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Snx29Q9D3S3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx29Q9D3S3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx29Q9D3S3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.71■□□□□ 0.75
Snx29Q9D3S3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx29Q9D3S3 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.71■□□□□ 0.75
Snx29Q9D3S3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx29Q9D3S3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Snx29Q9D3S3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Snx29Q9D3S3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx29Q9D3S3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snx29Q9D3S3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Snx29Q9D3S3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Snx29Q9D3S3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Snx29Q9D3S3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.7■□□□□ 0.74
Snx29Q9D3S3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.7■□□□□ 0.74
Snx29Q9D3S3 Tgds-204ENSMUST00000228543 1594 ntBASIC19.7■□□□□ 0.74
Snx29Q9D3S3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx29Q9D3S3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx29Q9D3S3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx29Q9D3S3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.7■□□□□ 0.74
Snx29Q9D3S3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.7■□□□□ 0.74
Snx29Q9D3S3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Snx29Q9D3S3 Gm7367-201ENSMUST00000057611 492 ntBASIC19.7■□□□□ 0.74
Snx29Q9D3S3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snx29Q9D3S3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Snx29Q9D3S3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snx29Q9D3S3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Snx29Q9D3S3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx29Q9D3S3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx29Q9D3S3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx29Q9D3S3 AA414768-201ENSMUST00000121924 1257 ntBASIC19.69■□□□□ 0.74
Snx29Q9D3S3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snx29Q9D3S3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snx29Q9D3S3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Snx29Q9D3S3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snx29Q9D3S3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.69■□□□□ 0.74
Snx29Q9D3S3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snx29Q9D3S3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Snx29Q9D3S3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snx29Q9D3S3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx29Q9D3S3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx29Q9D3S3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx29Q9D3S3 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.68■□□□□ 0.74
Snx29Q9D3S3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Snx29Q9D3S3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snx29Q9D3S3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.68■□□□□ 0.74
Snx29Q9D3S3 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.68■□□□□ 0.74
Snx29Q9D3S3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx29Q9D3S3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx29Q9D3S3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx29Q9D3S3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx29Q9D3S3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snx29Q9D3S3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Snx29Q9D3S3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms