Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd2Q9CZB3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd2Q9CZB3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd2Q9CZB3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd2Q9CZB3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thumpd2Q9CZB3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.81■□□□□ 0.6
Thumpd2Q9CZB3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thumpd2Q9CZB3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thumpd2Q9CZB3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thumpd2Q9CZB3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd2Q9CZB3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd2Q9CZB3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd2Q9CZB3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd2Q9CZB3 Nespas-201ENSMUST00000143738 1083 ntBASIC18.77■□□□□ 0.6
Thumpd2Q9CZB3 Gm7291-201ENSMUST00000199147 382 ntBASIC18.77■□□□□ 0.6
Thumpd2Q9CZB3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.77■□□□□ 0.6
Thumpd2Q9CZB3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd2Q9CZB3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.77■□□□□ 0.6
Thumpd2Q9CZB3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd2Q9CZB3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd2Q9CZB3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Thumpd2Q9CZB3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Thumpd2Q9CZB3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd2Q9CZB3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd2Q9CZB3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd2Q9CZB3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd2Q9CZB3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Thumpd2Q9CZB3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.75■□□□□ 0.59
Thumpd2Q9CZB3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd2Q9CZB3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd2Q9CZB3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Thumpd2Q9CZB3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms