Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.91■□□□□ 0.3
Otud1Q9CUB6 Mir1199-201ENSMUST00000117015 119 ntBASIC16.91■□□□□ 0.3
Otud1Q9CUB6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Otud1Q9CUB6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.91■□□□□ 0.3
Otud1Q9CUB6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Otud1Q9CUB6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Otud1Q9CUB6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.91■□□□□ 0.3
Otud1Q9CUB6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Otud1Q9CUB6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Otud1Q9CUB6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Otud1Q9CUB6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Mir2861-201ENSMUST00000175539 82 ntBASIC16.9■□□□□ 0.3
Otud1Q9CUB6 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.9■□□□□ 0.3
Otud1Q9CUB6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Otud1Q9CUB6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Gm37292-201ENSMUST00000192062 758 ntBASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.89■□□□□ 0.29
Otud1Q9CUB6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Gm6576-201ENSMUST00000169678 883 ntBASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Mir6982-201ENSMUST00000184354 68 ntBASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Otud1Q9CUB6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Otud1Q9CUB6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Gm715-201ENSMUST00000117865 831 ntBASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Otud1Q9CUB6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms