Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msantd3Q9CR78 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Msantd3Q9CR78 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Msantd3Q9CR78 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msantd3Q9CR78 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msantd3Q9CR78 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msantd3Q9CR78 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.21■□□□□ 0.35
Msantd3Q9CR78 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Msantd3Q9CR78 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msantd3Q9CR78 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msantd3Q9CR78 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Msantd3Q9CR78 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Msantd3Q9CR78 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Msantd3Q9CR78 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msantd3Q9CR78 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Gm3375-201ENSMUST00000203929 796 ntBASIC17.19■□□□□ 0.34
Msantd3Q9CR78 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Msantd3Q9CR78 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Gm13559-201ENSMUST00000120476 863 ntBASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msantd3Q9CR78 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msantd3Q9CR78 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msantd3Q9CR78 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Msantd3Q9CR78 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.17■□□□□ 0.34
Msantd3Q9CR78 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Msantd3Q9CR78 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Msantd3Q9CR78 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.17■□□□□ 0.34
Msantd3Q9CR78 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.17■□□□□ 0.34
Msantd3Q9CR78 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Msantd3Q9CR78 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msantd3Q9CR78 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msantd3Q9CR78 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Msantd3Q9CR78 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.16■□□□□ 0.34
Msantd3Q9CR78 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Msantd3Q9CR78 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msantd3Q9CR78 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msantd3Q9CR78 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Msantd3Q9CR78 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msantd3Q9CR78 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msantd3Q9CR78 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Msantd3Q9CR78 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msantd3Q9CR78 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.16■□□□□ 0.34
Msantd3Q9CR78 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Msantd3Q9CR78 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms