Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CR55 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CR55 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CR55 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CR55 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.65■□□□□ 0.26
Q9CR55 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CR55 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CR55 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CR55 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CR55 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CR55 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CR55 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q9CR55 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Q9CR55 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CR55 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CR55 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CR55 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Q9CR55 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CR55 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Q9CR55 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CR55 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Q9CR55 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CR55 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.64■□□□□ 0.25
Q9CR55 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.64■□□□□ 0.25
Q9CR55 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CR55 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Q9CR55 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Q9CR55 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CR55 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CR55 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q9CR55 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CR55 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CR55 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CR55 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Q9CR55 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Q9CR55 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CR55 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.63■□□□□ 0.25
Q9CR55 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Q9CR55 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CR55 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.63■□□□□ 0.25
Q9CR55 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CR55 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.63■□□□□ 0.25
Q9CR55 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CR55 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CR55 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CR55 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CR55 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CR55 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q9CR55 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Q9CR55 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
Q9CR55 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.62■□□□□ 0.25
Q9CR55 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.62■□□□□ 0.25
Q9CR55 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Q9CR55 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Q9CR55 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Q9CR55 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Q9CR55 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q9CR55 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q9CR55 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q9CR55 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Q9CR55 Gm21956-201ENSMUST00000179946 522 ntBASIC16.61■□□□□ 0.25
Q9CR55 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Q9CR55 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.61■□□□□ 0.25
Q9CR55 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q9CR55 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q9CR55 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q9CR55 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q9CR55 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Q9CR55 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q9CR55 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q9CR55 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Q9CR55 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Q9CR55 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q9CR55 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q9CR55 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q9CR55 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Q9CR55 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Q9CR55 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q9CR55 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q9CR55 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q9CR55 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q9CR55 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Q9CR55 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q9CR55 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Q9CR55 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Q9CR55 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Q9CR55 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms