Protein–RNA interactions for Protein: Q9CQX0

Otub2, Ubiquitin thioesterase OTUB2, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub2Q9CQX0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Otub2Q9CQX0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Otub2Q9CQX0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.38■□□□□ 0.37
Otub2Q9CQX0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Otub2Q9CQX0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Otub2Q9CQX0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Otub2Q9CQX0 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.38■□□□□ 0.37
Otub2Q9CQX0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Otub2Q9CQX0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Otub2Q9CQX0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Otub2Q9CQX0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Otub2Q9CQX0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Otub2Q9CQX0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Otub2Q9CQX0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub2Q9CQX0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub2Q9CQX0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub2Q9CQX0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Gm6433-201ENSMUST00000118634 875 ntBASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otub2Q9CQX0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Otub2Q9CQX0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Otub2Q9CQX0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Otub2Q9CQX0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Otub2Q9CQX0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Otub2Q9CQX0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.33■□□□□ 0.36
Otub2Q9CQX0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.33■□□□□ 0.36
Otub2Q9CQX0 Gm30025-201ENSMUST00000218555 728 ntBASIC17.33■□□□□ 0.36
Otub2Q9CQX0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otub2Q9CQX0 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.32■□□□□ 0.36
Otub2Q9CQX0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.32■□□□□ 0.36
Otub2Q9CQX0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Otub2Q9CQX0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otub2Q9CQX0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otub2Q9CQX0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms